--- a/README.markdown Sat Feb 01 15:22:36 2020 -0500
+++ b/README.markdown Sat Feb 01 21:11:46 2020 -0500
@@ -333,3 +333,14 @@
Attempted to figure out how to acquire MS Word for the class. Apparently
there's a web version of Word now? If I can use that, at least I won't have to
spin up a full Windows VM to write the papers…
+
+Installed `sra-toolkit` from Ubuntu's repository. Unfortunately it doesn't seem
+to come with `fasterq-dump`, only the older `fastq-dump`, at least according to
+`dpkg-query -L sra-toolkit`. Installed the latest binary from their site
+instead.
+
+Poked around at both `fastq-dump` and `fasterq-dump`. `fasterq-dump` seems more
+documented and user friendly, and is definitely faster. The biggest speedup
+came from telling it to use RAM as its temporary filesystem with `-t /dev/shm`,
+which cut the time down to 1/3. Guess all this RAM *is* actually good for
+something.