tornado-plots/index.html @ e499b9c655d4

Tornado plots
author Steve Losh <steve@stevelosh.com>
date Wed, 01 Nov 2023 17:04:04 -0400
parents (none)
children 702c8cb7093e
<!doctype html>

<html>
    <head>
        <title>Tornado Plot Demo</title>
        <script src="p5.min.js"></script>
        <script src="sketch.js"></script>
    </head>
    <body>
        <main>
        </main>
        <p>The graph is 100kb wide.</p>

        <ul>
            <li><b># of reads:</b> number of reads to plot.</li>
            <li><b>ori:</b> position of the origin.</li>
            <li><b>left/right fork rates:</b> how fast each fork progresses (nt/second).</li>
            <li><b>rate noise:</b> how much noise to add to each fork's rate (per fork, proportion of total rate).</li>
            <li><b>synthesis time:</b> simulated synthesis time (seconds).</li>
            <li><b>overcut rate:</b> proportion of reads to cut apart after generation.</li>
            <li><b>overcut exponent:</b> kludge to change distribution of cut positions (1 to cut uniformly, higher to tend to cut closer to ends).</li>
            <li><b>block locations:</b> position of blocking elements (does nothing if block time is zero).</li>
            <li><b>block times:</b> how long to pause at a particular block (seconds).</li>
        </ul>
    </body>
</html>