refs/aluya-ont.fasta @ 97e37a4c1138 default tip

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author Steve Losh <steve@stevelosh.com>
date Tue, 13 Oct 2026 10:31:54 -0400
parents (none)
children (none)
>AluYa5 Normal Short-Way
CTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>AluYa5 Normal Long-Way
TGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAG
>AluYa5 Inverted Short-Way
GACGTGAGGTCGGACCCGCTGTCTCGCTCTGAGGCAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
>AluYa5 Inverted Long-Way
ACCGCCCTAGAGCCGAGTGACGTTCGAGGCGGAGGGCCCAAGTGCGGTAAGAGGACGGAGTCGGAGGGTTCATCGACCCTGATGTCCGCGGGCGGTGATGCGGGCCGATTAAAAAACATAAAAATCATCTCTGCCCCAAAGTGGCAAAATC
>Nanopore Adapter Top Strand
CCTGTACTTCGTTCAGTTACGTATTGCT
>Nanopore Adapter Bottom Strand
GCAATACGTAACTGAACGAAGTACAGG
>Full AluYa5
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>Full AluYa5 (Revcomp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC