# HG changeset patch # User Steve Losh # Date 1699020769 14400 # Node ID 05ef9c8cbeeb4e75d4c48acd5fc2da0965135b2e # Parent 5390fa62ede74fc6105d3a86fbf9178e55b6d538 More diff -r 5390fa62ede7 -r 05ef9c8cbeeb bin/unboxify --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/bin/unboxify Fri Nov 03 10:12:49 2023 -0400 @@ -0,0 +1,20 @@ +#!/usr/bin/env python3 + +import sys + +for line in sys.stdin: + for ch in line: + sys.stdout.write({ + '┤': '+', + '├': '+', + '┴': '+', + '┬': '+', + '┼': '+', + '└': '+', + '┘': '+', + '┐': '+', + '┌': '+', + '│': '|', + '—': '-', + }.get(ch, ch)) + diff -r 5390fa62ede7 -r 05ef9c8cbeeb remote/bash_profile --- a/remote/bash_profile Wed Oct 25 22:46:40 2023 -0400 +++ b/remote/bash_profile Fri Nov 03 10:12:49 2023 -0400 @@ -101,3 +101,8 @@ export GPG_TTY export EDITOR=vim + +export _Z_CMD=j +export _Z_DATA=$HOME/.z-bash + +. $HOME/src/dotfiles/z.sh diff -r 5390fa62ede7 -r 05ef9c8cbeeb remote/z.sh --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/remote/z.sh Fri Nov 03 10:12:49 2023 -0400 @@ -0,0 +1,267 @@ +# Copyright (c) 2009 rupa deadwyler. Licensed under the WTFPL license, Version 2 + +# maintains a jump-list of the directories you actually use +# +# INSTALL: +# * put something like this in your .bashrc/.zshrc: +# . /path/to/z.sh +# * cd around for a while to build up the db +# * PROFIT!! +# * optionally: +# set $_Z_CMD in .bashrc/.zshrc to change the command (default z). +# set $_Z_DATA in .bashrc/.zshrc to change the datafile (default ~/.z). +# set $_Z_MAX_SCORE lower to age entries out faster (default 9000). +# set $_Z_NO_RESOLVE_SYMLINKS to prevent symlink resolution. +# set $_Z_NO_PROMPT_COMMAND if you're handling PROMPT_COMMAND yourself. +# set $_Z_EXCLUDE_DIRS to an array of directories to exclude. +# set $_Z_OWNER to your username if you want use z while sudo with $HOME kept +# +# USE: +# * z foo # cd to most frecent dir matching foo +# * z foo bar # cd to most frecent dir matching foo and bar +# * z -r foo # cd to highest ranked dir matching foo +# * z -t foo # cd to most recently accessed dir matching foo +# * z -l foo # list matches instead of cd +# * z -e foo # echo the best match, don't cd +# * z -c foo # restrict matches to subdirs of $PWD +# * z -x # remove the current directory from the datafile +# * z -h # show a brief help message + +[ -d "${_Z_DATA:-$HOME/.z}" ] && { + echo "ERROR: z.sh's datafile (${_Z_DATA:-$HOME/.z}) is a directory." +} + +_z() { + + local datafile="${_Z_DATA:-$HOME/.z}" + + # if symlink, dereference + [ -h "$datafile" ] && datafile=$(readlink "$datafile") + + # bail if we don't own ~/.z and $_Z_OWNER not set + [ -z "$_Z_OWNER" -a -f "$datafile" -a ! -O "$datafile" ] && return + + _z_dirs () { + [ -f "$datafile" ] || return + + local line + while read line; do + # only count directories + [ -d "${line%%\|*}" ] && echo "$line" + done < "$datafile" + return 0 + } + + # add entries + if [ "$1" = "--add" ]; then + shift + + # $HOME and / aren't worth matching + [ "$*" = "$HOME" -o "$*" = '/' ] && return + + # don't track excluded directory trees + if [ ${#_Z_EXCLUDE_DIRS[@]} -gt 0 ]; then + local exclude + for exclude in "${_Z_EXCLUDE_DIRS[@]}"; do + case "$*" in "$exclude"*) return;; esac + done + fi + + # maintain the data file + local tempfile="$datafile.$RANDOM" + local score=${_Z_MAX_SCORE:-9000} + _z_dirs | awk -v path="$*" -v now="$(date +%s)" -v score=$score -F"|" ' + BEGIN { + rank[path] = 1 + time[path] = now + } + $2 >= 1 { + # drop ranks below 1 + if( $1 == path ) { + rank[$1] = $2 + 1 + time[$1] = now + } else { + rank[$1] = $2 + time[$1] = $3 + } + count += $2 + } + END { + if( count > score ) { + # aging + for( x in rank ) print x "|" 0.99*rank[x] "|" time[x] + } else for( x in rank ) print x "|" rank[x] "|" time[x] + } + ' 2>/dev/null >| "$tempfile" + # do our best to avoid clobbering the datafile in a race condition. + if [ $? -ne 0 -a -f "$datafile" ]; then + env rm -f "$tempfile" + else + [ "$_Z_OWNER" ] && chown $_Z_OWNER:"$(id -ng $_Z_OWNER)" "$tempfile" + env mv -f "$tempfile" "$datafile" || env rm -f "$tempfile" + fi + + # tab completion + elif [ "$1" = "--complete" -a -s "$datafile" ]; then + _z_dirs | awk -v q="$2" -F"|" ' + BEGIN { + q = substr(q, 3) + if( q == tolower(q) ) imatch = 1 + gsub(/ /, ".*", q) + } + { + if( imatch ) { + if( tolower($1) ~ q ) print $1 + } else if( $1 ~ q ) print $1 + } + ' 2>/dev/null + + else + # list/go + local echo fnd last list opt typ + while [ "$1" ]; do case "$1" in + --) while [ "$1" ]; do shift; fnd="$fnd${fnd:+ }$1";done;; + -*) opt=${1:1}; while [ "$opt" ]; do case ${opt:0:1} in + c) fnd="^$PWD $fnd";; + e) echo=1;; + h) echo "${_Z_CMD:-z} [-cehlrtx] args" >&2; return;; + l) list=1;; + r) typ="rank";; + t) typ="recent";; + x) sed -i -e "\:^${PWD}|.*:d" "$datafile";; + esac; opt=${opt:1}; done;; + *) fnd="$fnd${fnd:+ }$1";; + esac; last=$1; [ "$#" -gt 0 ] && shift; done + [ "$fnd" -a "$fnd" != "^$PWD " ] || list=1 + + # if we hit enter on a completion just go there + case "$last" in + # completions will always start with / + /*) [ -z "$list" -a -d "$last" ] && builtin cd "$last" && return;; + esac + + # no file yet + [ -f "$datafile" ] || return + + local cd + cd="$( < <( _z_dirs ) awk -v t="$(date +%s)" -v list="$list" -v typ="$typ" -v q="$fnd" -F"|" ' + function frecent(rank, time) { + # relate frequency and time + dx = t - time + return int(10000 * rank * (3.75/((0.0001 * dx + 1) + 0.25))) + } + function output(matches, best_match, common) { + # list or return the desired directory + if( list ) { + if( common ) { + printf "%-10s %s\n", "common:", common > "/dev/stderr" + } + cmd = "sort -n >&2" + for( x in matches ) { + if( matches[x] ) { + printf "%-10s %s\n", matches[x], x | cmd + } + } + } else { + if( common && !typ ) best_match = common + print best_match + } + } + function common(matches) { + # find the common root of a list of matches, if it exists + for( x in matches ) { + if( matches[x] && (!short || length(x) < length(short)) ) { + short = x + } + } + if( short == "/" ) return + for( x in matches ) if( matches[x] && index(x, short) != 1 ) { + return + } + return short + } + BEGIN { + gsub(" ", ".*", q) + hi_rank = ihi_rank = -9999999999 + } + { + if( typ == "rank" ) { + rank = $2 + } else if( typ == "recent" ) { + rank = $3 - t + } else rank = frecent($2, $3) + if( $1 ~ q ) { + matches[$1] = rank + } else if( tolower($1) ~ tolower(q) ) imatches[$1] = rank + if( matches[$1] && matches[$1] > hi_rank ) { + best_match = $1 + hi_rank = matches[$1] + } else if( imatches[$1] && imatches[$1] > ihi_rank ) { + ibest_match = $1 + ihi_rank = imatches[$1] + } + } + END { + # prefer case sensitive + if( best_match ) { + output(matches, best_match, common(matches)) + exit + } else if( ibest_match ) { + output(imatches, ibest_match, common(imatches)) + exit + } + exit(1) + } + ')" + + if [ "$?" -eq 0 ]; then + if [ "$cd" ]; then + if [ "$echo" ]; then echo "$cd"; else builtin cd "$cd"; fi + fi + else + return $? + fi + fi +} + +alias ${_Z_CMD:-z}='_z 2>&1' + +[ "$_Z_NO_RESOLVE_SYMLINKS" ] || _Z_RESOLVE_SYMLINKS="-P" + +if type compctl >/dev/null 2>&1; then + # zsh + [ "$_Z_NO_PROMPT_COMMAND" ] || { + # populate directory list, avoid clobbering any other precmds. + if [ "$_Z_NO_RESOLVE_SYMLINKS" ]; then + _z_precmd() { + (_z --add "${PWD:a}" &) + : $RANDOM + } + else + _z_precmd() { + (_z --add "${PWD:A}" &) + : $RANDOM + } + fi + [[ -n "${precmd_functions[(r)_z_precmd]}" ]] || { + precmd_functions[$(($#precmd_functions+1))]=_z_precmd + } + } + _z_zsh_tab_completion() { + # tab completion + local compl + read -l compl + reply=(${(f)"$(_z --complete "$compl")"}) + } + compctl -U -K _z_zsh_tab_completion _z +elif type complete >/dev/null 2>&1; then + # bash + # tab completion + complete -o filenames -C '_z --complete "$COMP_LINE"' ${_Z_CMD:-z} + [ "$_Z_NO_PROMPT_COMMAND" ] || { + # populate directory list. avoid clobbering other PROMPT_COMMANDs. + grep "_z --add" <<< "$PROMPT_COMMAND" >/dev/null || { + PROMPT_COMMAND="$PROMPT_COMMAND"$'\n''(_z --add "$(command pwd '$_Z_RESOLVE_SYMLINKS' 2>/dev/null)" 2>/dev/null &);' + } + } +fi diff -r 5390fa62ede7 -r 05ef9c8cbeeb vim/custom-dictionary.utf-8.add --- a/vim/custom-dictionary.utf-8.add Wed Oct 25 22:46:40 2023 -0400 +++ b/vim/custom-dictionary.utf-8.add Fri Nov 03 10:12:49 2023 -0400 @@ -354,3 +354,4 @@ retrotransposon transposon retrotransposons +wildcard diff -r 5390fa62ede7 -r 05ef9c8cbeeb vim/ftplugin/nextflow/folding.vim --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/vim/ftplugin/nextflow/folding.vim Fri Nov 03 10:12:49 2023 -0400 @@ -0,0 +1,16 @@ +setlocal foldmethod=expr +setlocal foldexpr=GetNextflowFold(v:lnum) + +function! GetNextflowFold(lnum) + let line = getline(a:lnum) + + if line =~ '^\S.*{$' + return '>1' + elseif line =~ '^}$' + return '<1' + elseif line =~ '^\S' + return 0 + else + return "=" + end +endfunction diff -r 5390fa62ede7 -r 05ef9c8cbeeb vim/vimrc --- a/vim/vimrc Wed Oct 25 22:46:40 2023 -0400 +++ b/vim/vimrc Fri Nov 03 10:12:49 2023 -0400 @@ -1128,6 +1128,15 @@ augroup END " }}} +" NextFlow {{{ + +augroup ft_nextflow + au! + + " au BufRead,BufNewFile *.nf set ft=groovy +augroup END + +" }}} " Nginx {{{ augroup ft_nginx @@ -1334,6 +1343,7 @@ vmap -< ++< vmap -^ ++^ vmap -V ++v +vmap -- +- " }}} " Clam {{{